BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037B01SP1|AL430336
(881 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1763 1737 0.0
>3x_Contig1763
Length = 22654
Score = 1737 bits (875), Expect = 0.0
Identities = 877/879 (99%)
Strand = Plus / Plus
Query: 3 ttccattcagcgccctttggagccaaaggtctacccttgatgtaatcgaaagtagtttga 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16537 ttccattcagcgccctttggagccaaaggtctacccttgatgtaatcgaaagtagtttga 16596
Query: 63 tctggttgaatcaaaccggctctggcaccaccttcgatggccatattacacatggacata 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16597 tctggttgaatcaaaccggctctggcaccaccttcgatggccatattacacatggacata 16656
Query: 123 cgggcttccatagacagttcctcaattgcttgacctgcgaattcgataacacaaccagta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16657 cgggcttccatagacagttcctcaattgcttgacctgcgaattcgataacacaaccagta 16716
Query: 183 ccacccgcagtaccaatgacaccgatgatgtgtaagatcaaatccttagaagtcactgat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16717 ccacccgcagtaccaatgacaccgatgatgtgtaagatcaaatccttagaagtcactgat 16776
Query: 243 ggggacaatggaccatcaacgtaaatkctcatgttcttcgacttggcctgaataatggtt 302
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 16777 ggggacaatggaccatcaacgtaaattctcatgttcttcgacttggcctgaataatggtt 16836
Query: 303 tgggtagccaagacgtgctcaacttcagaggtaccaataccaaatgcaagtgcaccaaac 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16837 tgggtagccaagacgtgctcaacttcagaggtaccaataccaaatgcaagtgcaccaaac 16896
Query: 363 gcaccgtgagtagaagtatgggaatcaccacacaccacagtggtgcctggcaatgtgaaa 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16897 gcaccgtgagtagaagtatgggaatcaccacacaccacagtggtgcctggcaatgtgaaa 16956
Query: 423 ccttgttctggaccaataatatgcacgataccttgtctagcatcagtcataccaaaaaat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16957 ccttgttctggaccaataatatgcacgataccttgtctagcatcagtcataccaaaaaat 17016
Query: 483 gtgactccaaaatccttaacgttttgttccaaagtttgaacttgcaaacgggaatcggct 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17017 gtgactccaaaatccttaacgttttgttccaaagtttgaacttgcaaacgggaatcggct 17076
Query: 543 tgcttaatgaaagatgcagtatcgacaaaattctttctggattcagtagggatgttgtga 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17077 tgcttaatgaaagatgcagtatcgacaaaattctttctggattcagtagggatgttgtga 17136
Query: 603 tccactgtagccaaggtacaatcaactcttctaacttttctaccagcattctttaaacct 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17137 tccactgtagccaaggtacaatcaactcttctaacttttctaccagcattctttaaacct 17196
Query: 663 tcaaaagcttgtggagaagtaacttcatgaaccaaatgtctatcaatatacaacaaatat 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17197 tcaaaagcttgtggagaagtaacttcatgaaccaaatgtctatcaatatacaacaaatat 17256
Query: 723 gatccagattcatccttatggacaatatggtcctggaaaaccttgtcatacaaggtttgt 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17257 gatccagattcatccttatggacaatatggtcctggaaaaccttgtcatacaaggtttgt 17316
Query: 783 ggaccgtttgattcggtagcagcaggagcagtcataatgggatataaatwaactctactt 842
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 17317 ggaccgtttgattcggtagcagcaggagcagtcataatgggatataaataaactctactt 17376
Query: 843 tactatgttcttgtctgactttttaacagatacagccct 881
|||||||||||||||||||||||||||||||||||||||
Sbjct: 17377 tactatgttcttgtctgactttttaacagatacagccct 17415
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5663
Number of Sequences: 1807
Number of extensions: 5663
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 881
length of database: 10,358,551
effective HSP length: 16
effective length of query: 865
effective length of database: 10,329,639
effective search space: 8935137735
effective search space used: 8935137735
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)